fda_table.RdGenerate a table for FDA define.pdf document
fda_table(x) fda_table_file(file)
| x | a yspec object |
|---|---|
| file | the full path to yaml specification file |
Character vector of latex code for the content of an FDA `define.pdf` document. It includes a table of contents as well as data spec tables for each dataset for a project.
#> name c d unit short source #> C + - . commented row indicator _yspec_lookup.yml #> USUBJID + - . USUBJID . #> ID - - . ID . #> EVID - - . event ID _yspec_lookup.yml #> MDV - - . MDV _yspec_lookup.yml #> SEQ - + . SEQ . #> AMT - - mg amount . #> II - - hours II . #> CMT - - . Compartment . #> TAFD - - hours TAFD . #> WT - - kg Weight . #> EGFR - - ml/min/1.73m2 eGFR _yspec_lookup.yml #> STUDY + + . Study . #> SEX - + . SEX _yspec_lookup.yml #> BQL - + . below limit of quantification . #> DV - - ng/mL DV . #> DV2 - - . DV2 . #> HAIR + + . HAIR . #> CLCR - - ml/min creatinine clearance . #> ALB - - g/dL adjusted albumin _yspec_lookup.ymlfda_table(spec)#> [1] "\\begin{longtable}{|p{0.75in}|p{1.85in}|p{0.6in}|p{1.8in}|}" #> [2] " \\hline" #> [3] "VARIABLE & LABEL & TYPE & CODES \\\\ " #> [4] " \\hline" #> [5] "\\endhead" #> [6] "\\hline" #> [7] "\\multicolumn{4}{l}{\\footnotesize Continued on next page}" #> [8] "\\endfoot" #> [9] "\\endlastfoot" #> [10] " \\hline" #> [11] "C & commented rows & character & values: ., C \\\\ " #> [12] " \\hline" #> [13] "USUBJID & universal subject identifier & character & \\\\ " #> [14] " \\hline" #> [15] "ID & NONMEM ID number & numeric & \\\\ " #> [16] " \\hline" #> [17] "EVID & event ID indicator & numeric & \\\\ " #> [18] " \\hline" #> [19] "MDV & missing DV indicator & numeric & \\\\ " #> [20] " \\hline" #> [21] "SEQ & record type indicators & numeric & 1 = concentration, 2 = response, 3 = other \\\\ " #> [22] " \\hline" #> [23] "AMT & dose amount (unit: mg) & numeric & \\\\ " #> [24] " \\hline" #> [25] "II & interdose interval (unit: hours) & numeric & \\\\ " #> [26] " \\hline" #> [27] "CMT & compartment number & numeric & values: 1, 2, 3, 4 \\\\ " #> [28] " \\hline" #> [29] "TAFD & time after first dose (unit: hours) & numeric & \\\\ " #> [30] " \\hline" #> [31] "WT & baseline weight (unit: kg) & numeric & \\\\ " #> [32] " \\hline" #> [33] "EGFR & estimated glomerular filtration rate (unit: ml/min/1.73m2) & numeric & \\\\ " #> [34] " \\hline" #> [35] "STUDY & study identifier & character & 100 = The first phase 1 study, 202 = The first phase 2 study conducted only at sites 1, 2, 3 when the formulation was still oral liquid only, 303 = The renal impairment study, 203 = The second phase 2 study \\\\ " #> [36] " \\hline" #> [37] "SEX & SEX & numeric & 0 = male, 1 = female \\\\ " #> [38] " \\hline" #> [39] "BQL & DV value is below the quantitation limit & numeric & 0 = FALSE, 1 = TRUE \\\\ " #> [40] " \\hline" #> [41] "DV & dependent variable (unit: ng/mL) & numeric & \\\\ " #> [42] " \\hline" #> [43] "DV2 & second dependent variable & numeric & \\\\ " #> [44] " \\hline" #> [45] "HAIR & patient hair color & character & 0 = brown, 1 = blonde, 2 = black \\\\ " #> [46] " \\hline" #> [47] "CLCR & creatinine clearance (unit: ml/min) & numeric & \\\\ " #> [48] " \\hline" #> [49] "ALB & adjusted albumin (unit: g/dL) & numeric & \\\\ " #> [50] " \\hline" #> [51] "\\end{longtable}"