Functions to parse code blocks

Most of the basic blocks are listed in this help topic. But see also PKMODEL() which has more-involved options and is documented separately.

PARAM(
  x,
  env,
  pos = 1,
  annotated = FALSE,
  object = NULL,
  as_object = FALSE,
  covariates = FALSE,
  ...
)

FIXED(x, env, pos = 1, annotated = FALSE, ...)

THETA(
  x,
  env,
  pos = 1,
  annotated = FALSE,
  object = NULL,
  as_object = FALSE,
  name = "THETA",
  fill = NULL,
  ...
)

INIT(x, env, pos = 1, annotated = FALSE, object = NULL, as_object = FALSE, ...)

CMT(
  x,
  env,
  pos = 1,
  annotated = FALSE,
  object = NULL,
  as_object = FALSE,
  number = NULL,
  prefix = "A",
  ...
)

CAPTURE(x, env, pos = 1, annotated = FALSE, ...)

HANDLEMATRIX(
  x,
  env,
  pos = 1,
  annotated = FALSE,
  object = NULL,
  as_object = FALSE,
  name = "...",
  type = NULL,
  oclass = "",
  prefix = "",
  labels = NULL,
  unlinked = FALSE,
  ...
)

Arguments

x: data
env: parse environment
pos: block position
annotated: logical
object: the name of an object in ENV
as_object: indicates that object code is being provided
covariates: logical
...: passed
name: block name
fill: deprecated; not used
number: number of compartments to create
prefix: a prefix to add to the label
type: internal use
oclass: internal use
labels: aliases to use for simulated ETA values
unlinked: internal use

Details

When using object or as_object populate the block contents, the following types are required

PARAM: a named list
INIT : a named list
THETA : a numeric vector; names are ignored
CMT: a character vector
OMEGA: matrix; set rownames on the matrix to create ETA labels; setting rownames is the only way to specify labels when working through the object or as_object directives
SIGMA: matrix; set rownames on the matrix to create EPS labels; setting rownames is the only way to specify labels when working through the object or as_object directives

Arguments

Details

See also