Changelog

pmtables 0.4.0

  • Add cols_omit option to omit column header data (#213)

  • Add pt_demographics function to generate a new table of both continuous and categorical data (#186, #249)

  • Add title_side argument to colsplit() so that the title can be taken from left or right side of split (#231)

  • Add hline argument to rowgroup() constructor to make the horizontal line above the panel data optional (#215)

  • Refactor pt_data_inventory() to calculate percent BLQ using denomninator that is the sum of the number of observations BLQ and non-BLQ / non-missing (#221, #222)

  • st_asis() gains a method for pmtable objects (#236)

  • List names are now escaped when passing a list of tables to st2report() and friends (#232)

  • Add newline after printing table text using st_asis() (#224)

pmtables 0.3.3

  • Fix bug where arguments could not be passed along to stable_long() when coercing pmtable output (#203)

  • Fix bug where user-specified font size was not getting propagated to long table output with stable_long() (#204)

pmtables 0.3.2

  • Fix cols renaming and utilization of table argument in pt_cont_wide; add tests for column renaming for cat / cont / long / wide #199
  • Fix error message when duplicate panels are found #198

pmtables 0.3.1

  • Add .list argument to st_rename() allowing user to pass rename information as a named list with format old name = new name #189
  • Fix bug where drop_miss wasn’t executing correctly #182
  • stable_long() is now a generic function with methods for data.frame, stobject and pmtable #179
  • Expand documentation for data summary functions
  • st_span() was slightly refactored so that it would dispatch to st_span_split() when the split argument was passed #173
  • Fixed a bug where span_split() was updating column names, but this was happening before other spans were calculated #172
  • The categorical data summary functions now check for missing values (NA) and will replace them with the string "NA" and issue a warning #117

pmtables 0.3.0

  • Add landscape mode when previewing tables with st2report(), st2article() or st2doc(); see landscape argument to st_wrap() #129
  • Add lt_cap_short argument to stable_long() to set a short table title that will appear in list of tables #131
  • Fix a bug in continuous data summary tables when no observations were found in a particular group; use na_fill argument to set placeholder #133
  • Add ability to accumulate hline indices when set with st_hline() #134
  • Fix a bug in cols_bold that prevented sanitizing text prior to styling as bold #141
  • Add ability to introduce row breaks in spanner titles #143
  • Add st2report() to quickly preview tables in a real-like report document, build directly with pdflatex #148
  • Add st2article() to quickly preview tables in a latex article-like, built directly with pdflatex #148
  • Add st_asis() function and asis argument to st_wrap(); pipe tables to st_asis() or use asis argument to render tables in line in an Rmd document; in addition to formatting output “as-is”, latex dependencies are also invoked #149
  • Expand yaml_as_df() functionality to accept table columns by position, rather than name #154
  • Add stable() method for stobject #159
  • Fix bug where column spanners were not getting displayed in longtable #165

pmtables 0.2.0

  • Add by argument to pt_cont_long so that, when panel is also passed, the table is paneled by col and is “by” the panel variable #92
  • Refactor pt_cat_long so that summary numbers are shown underneath column labels #102
  • Refactor longtable row and column spacing so that they use row and col in tab_size() with the same behavior as tabular / stable() #105
  • Add cols_extra feature, allowing extra column header information passed as a data frame (see tab_cols()) #102, #118
  • Added documentation for data arguments to reinforce that pmtables doesn’t filter or subset data prior to processing or summarizing #120
  • Fix bug in stable_long() where stable_file wasn’t getting saved
  • Add n summary column to pt_cat_wide() #80
  • Add functions that return table notes for continuous and discrete data summaries and data inventory tables #114
  • Make pt_wrap() generic; add method for stable_long that doesn’t wrap with table #121

pmtables 0.1.0

  • Adding NEWS file
  • Add duplicates_ok argument to rowpanel
  • Error if duplicate panel names found and duplicates_ok is FALSE
  • Refactor how panel groupings are determined - non-repeating values rather than unique
  • Added debug_data argument to stable; this adds an environment to the output with some data that underlies the table; the environment can be accessed with get_debug_data()
  • Added complete series of st_* functions that can be used in a pipeline to set arguments for stable(); see inst/demo-pipe.pdf
  • st2doc will render multiple page document when a list of tables is passed in as text
  • Changed stable argument from bold_cols to col_bold
  • Column names are only rendered with bold font when requested using col_bold argument
  • The prefixes for r_file and output_file are only settable with options r.file.label and output.file.label, respectively
  • Dropped col_space, row_space and fontsize arguments to stable(); they should be set with a call to tab_size
  • Add st_sizes() to set sizes argument to stable()
  • Refactor stable() function in order to reduce cyclomatic complexity and shorten overall function length in response to brief review and comment by TS representative
  • Make stable a generic function; methods for data.frame and pmtable
  • All pmtables functions now accept panel argument as a rowgroup object
  • Add as.panel() function for constructing rowgroup objects
  • For pmtables functions: when panel is passed with an alternate name, the name is is used to set the prefix
  • Fixed bug where column names were getting sanitized before rename happened #62
  • Pick up option pmtables.dir to set output directory for stable_save()
  • Pick up option mrg.script to set script name in st_files() and tab_notes()
  • Refactored the way that table cols and units are assembled; column labels are split on ... to create multi-line column names
  • Add header_row argument to tab_cols() to control the spacing between column labels and between labels and units
  • Fix warning message when trying to align a column not in the data set
  • Fix warning message when trying to add unit to column not in the data set
  • Add several new package options; see ?pt_opts
  • Add center argument to col_fixed; when ragged is no, the column can still be fixed and centered
  • Dots (...) added to st_new() / st_data() to be collected by args
  • Add st_units() pipeline function
  • Add tex_bold() function to style data frame contents
  • Add tex_it() function to style data frame contents
  • Add st_edit()
  • Refactor st_hline(); allow to add hline by regexp across whole data frame or targeted
  • Refactored st_bold and st_it to target columns or whole data frame
  • Add st_drop()
  • Add data sets analysis1, pmt_pk, pmt_first, pmt_obs
  • Change argument names for tab_cols: all col_xyz arguments are renamed to cols_xyz
  • Add find_bq_col function to allow either BQL or BLQ as default value for bq_col argument to pt_data_inventory
  • Add pattern and cols arguments to st_sumrow; this allows calculation of rows based on a regular expression
  • Add df_grep_rows and df_grepl_rows functions for finding rows where a regular expression is matched
  • Add pmtables.escape option to pass a character vector of items to be escaped
  • Unit of escape is now individual positions in a vector rather than the whole vector itself
  • No longer requiring or assuming that header_row (tab_size()) is a negative number; enter a negative number if you want to remove space between header rows; this should only be required when row space is increased